Endocrine oncology

An Interpretable Machine-Learning Model for Predicting Occult Central Lymph Node Metastasis in Papillary Thyroid Cancer

J Clin Endocrinol MetabPublished Retrospective cohort study

Authors' conclusion

This is the first study to identify RET fusion positivity as an independent OLNM risk factor in cN0 PTC. The developed RF model demonstrates moderate predictive performance for OLNM risk and provides a framework for integrating clinical, sonographic, and molecular data, and is deployed as a web calculator (https://predictingoccultlymphnodemetastasis.shinyapps.io/web3/).

Study context

Population
Patients with clinically lymph node negative (cN0) papillary thyroid carcinoma (PTC), August 2018–August 2023
Participants
961 patients
Outcome
Prediction of occult central lymph node metastasis (OLNM)
Methodological detailsmachine-learning prediction model, random split into training and test sets, internal validation in tumors ≤1 cm, SHAP interpretability
  • Machine-learning prediction model
  • Random split into training and test sets
  • Internal validation in tumors ≤1 cm
  • SHAP interpretability

Main finding

As reported in the abstract

Predictive performance for OLNM
GroupAUC, training setAUC, test setBrier score, training setBrier score, test set
Random forest (RF)0.9060.7330.1350.212

Random forest (RF)

AUC, training set0.906
AUC, test set0.733
Brier score, training set0.135
Brier score, test set0.212

Observational data: associations, not effects.

Further findings

OutcomeValues
Internal validation in tumors ≤1 cm (test-set subset)RF AUC 0.719

Independent risk factors for occult lymph node metastasis (OLNM)

Predictors incorporated into the model
9
RET fusion positivity and BRAF mutation positivity were independent molecular risk factors, alongside 6 clinical and ultrasonographic variables

SHAP analysis

Top predictors: size, age, and clustered punctate echogenic foci

Original publication

An Interpretable Machine-Learning Model for Predicting Occult Central Lymph Node Metastasis in Papillary Thyroid Cancer. J Clin Endocrinol Metab. Published 11 December 2025. doi:10.1210/clinem/dgaf636

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